On the other hand, Fast Chromatogram Viewer has not been updated for a pretty long time. This will generally create a very long trace. Setting trim5 and trim3 to NULL will show the complete trace 5 and 3 of the called bases, respectively. It runs on low CPU and RAM, so it doesn't affect the overall performance of the PC. The range of the trace data shown is trimmed to the called sequence by default. You can open a chromatogram file by selecting File Open in MacVector, or by dragging the file onto the MacVector application icon, whether it be on the dock, on your desktop, or in the MacVector application folder. ![]() Information concerning products not manufactured or distributed by MacVector, Inc is provided without warranty or representation of any kind, and MacVector, Inc will not be liable for any damages. There were no stability problems in our tests, so the program did not hang, crash or pop up error dialogs. scf chromatogram files directly in MacVector and view the areas under the curve in the Raw Data tab. MacVector, Inc reserves the right to make changes, without notice, both to this publication and to the product it describes. You can also disable skins, adjust the main frame's opacity, and turn off the embedded file system. Change some program options easilyįast Chromatogram Viewer can be asked to automatically run at every Windows boot until further notice, as well as to minimize to the system tray area. The free Sequence Scanner Software enables you to view, edit, print and export sequence data generated using the Applied Biosystems Genetic Analyzers. It is possible to trim the ends by setting the number and threshold for the section to keep, along with the window length and trimmed ends color. DNA Chromatogram ExplorerView and trim chromatogram files (SCF. (Be sure to click the Autoscale tool to correct for the difference in scaling.) You can see that the peaks in the TIC plot elute slightly later than those in the UV chromatogram (figure 2). Editing the consensus sequence will apply the change to all the sequences in the alignment. From the 2D Channels tab, we can select the TIC plot and overlay it with the UV chromatogram. ![]() Trim the remaining sequences by clicking Allow Editing then selecting the bases from base 563 onwards on the consensus sequence and hitting the delete key. Examine Chromatogram files and configure settingsĪ graphical representation is shown on the bottom part of the screen, which can be easily navigated by moving a slider and zooming in and out. In many of the sequences the region following this motif is already trimmed off. As far as the interface is concerned, Fast Chromatogram Viewer is packed in a seemingly outdated window with a neatly organized layout, where you can use the Explorer-based folder structure to navigate directories and open Chromatogram files. The entire setup operation takes little time and effort. It comes loaded with a few configuration settings that should be easy to figure out, regardless of your previous level of experience with such tools. Fast Chromatogram Viewer is a simple-to-use Windows program designed to display the content of Chromatogram files, namely those with the SCF, ABI, AB1, AB extension.
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